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Comments (6)

agosiewska avatar agosiewska commented on July 24, 2024 1

I've updated DALEX again and now it works :)
It would be cool to have support for multiple models, so I'm leaving this issue open.
Hope Hubert will do it :)

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hbaniecki avatar hbaniecki commented on July 24, 2024 1

Multiple models in both plotD3 should now supported :)

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pbiecek avatar pbiecek commented on July 24, 2024

Thanks,
current plotD3 does not support multiple models (here models for 3 classes)
I hope that Hubert will fix it some day.

For now please use it for continuous variable or binary classification only

library("DALEX")
library("iBreakDown")
library("randomForest")
set.seed(1313)
model <- randomForest(status == "fired" ~ . , data = HR)
new_observation <- HR_test[1,]

explainer_rf <- explain(model,
                        data = HR[1:1000,1:5],
                        y = HR$status[1:1000] == "fired")

bd_rf <- local_attributions(explainer_rf,
                            new_observation)
plotD3(bd_rf)

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agosiewska avatar agosiewska commented on July 24, 2024

Thanks, but it seems to me, that it works only for regression. You obtain regression random forest in the example above.

iBreakDown doesn't work for binary classification.

library("DALEX")
library("iBreakDown")
library("randomForest")
set.seed(1313)
# I've added factor here in random forest
model <- randomForest(factor(status == "fired") ~ . , data = HR) 
new_observation <- HR_test[1,]

explainer_rf <- explain(model,
                        data = HR[1:1000,1:5],
                        y = HR$status[1:1000] == "fired")

bd_rf <- local_attributions(explainer_rf,
                            new_observation)
plotD3(bd_rf)

image

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pbiecek avatar pbiecek commented on July 24, 2024

Would you please try DALEX in the latest version from GitHub (DALEX_0.2.7) ?

devtools::install_github("pbiecek/DALEX")

For binary classification, by default it takes scores only for the second class (I fixed it two days ago)

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agosiewska avatar agosiewska commented on July 24, 2024

Still the same. I've updated DALEX and iBreakdown

> sessionInfo()
R version 3.5.2 (2018-12-20)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows >= 8 x64 (build 9200)

Matrix products: default

locale:
[1] LC_COLLATE=Polish_Poland.1250  LC_CTYPE=Polish_Poland.1250   
[3] LC_MONETARY=Polish_Poland.1250 LC_NUMERIC=C                  
[5] LC_TIME=Polish_Poland.1250    

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] randomForest_4.6-14 iBreakDown_0.9.3    DALEX_0.2.7        

loaded via a namespace (and not attached):
 [1] jsonlite_1.6       splines_3.5.2      gtools_3.8.1       shiny_1.2.0       
 [5] assertthat_0.2.0   expm_0.999-3       sp_1.3-1           highr_0.7         
 [9] pdp_0.7.0          yaml_2.2.0         LearnBayes_2.15.1  r2d3_0.2.3        
[13] pillar_1.3.1       lattice_0.20-38    glue_1.3.0         digest_0.6.18     
[17] promises_1.0.1     colorspace_1.4-0   htmltools_0.3.6    httpuv_1.4.5.1    
[21] Matrix_1.2-15      plyr_1.8.4         klaR_0.6-14        pkgconfig_2.0.2   
[25] breakDown_0.1.6    questionr_0.7.0    gmodels_2.18.1     purrr_0.3.0       
[29] xtable_1.8-3       mvtnorm_1.0-8      scales_1.0.0       gdata_2.18.0      
[33] later_0.8.0        tibble_2.0.1       proxy_0.4-22       combinat_0.0-8    
[37] ggplot2_3.1.0      ggpubr_0.2         ALEPlot_1.1        agricolae_1.3-0   
[41] lazyeval_0.2.1     survival_2.43-3    magrittr_1.5       crayon_1.3.4      
[45] mime_0.6           deldir_0.1-16      nlme_3.1-137       MASS_7.3-51.1     
[49] class_7.3-14       tools_3.5.2        stringr_1.4.0      munsell_0.5.0     
[53] cluster_2.0.7-1    compiler_3.5.2     e1071_1.7-0.1      rlang_0.3.1       
[57] classInt_0.3-1     units_0.6-2        grid_3.5.2         rstudioapi_0.9.0  
[61] htmlwidgets_1.3    miniUI_0.1.1.1     boot_1.3-20        gtable_0.2.0      
[65] DBI_1.0.0          reshape2_1.4.3     AlgDesign_1.1-7.3  R6_2.4.0          
[69] yaImpute_1.0-31    gridExtra_2.3      knitr_1.21         dplyr_0.8.0.1     
[73] factorMerger_0.3.6 spdep_1.0-2        stringi_1.3.1      Rcpp_1.0.0        
[77] sf_0.7-2           spData_0.3.0       tidyselect_0.2.5   xfun_0.5          
[81] coda_0.19-2     

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