Comments (2)
Thanks!
I believe I've fixed this in daabf1a by requiring exact versions of the dependencies, and moving all of this into the environment.yml
file so conda will handle installing the Python modules versus setup.py
.
from plannotate.
And those should probably all be '==' , because streamlit put the cli within web, and in other news the script wants vegalite v4, and the latest is now 5, so that has to be explicit
etc
etc
So this works for an install line in docker:
RUN cd pLannotate && sed -i 's/bokeh=2/bokeh==2/' requirements.txt && sed -i 's/>=/==/' requirements.txt && echo "altair==4.2.2" >> requirements.txt && python3 setup.py install
from plannotate.
Related Issues (20)
- Entry size is too large -- must be 50000 bases or less HOT 6
- AttributeError: module 'streamlit' has no attribute 'cli' HOT 1
- Conda/mamba installation appears to be broken HOT 7
- any() takes 1 positional argument but 2 were given error HOT 6
- use my own annotation file HOT 7
- Annotating a large batch of plasmid reads HOT 5
- Retaining ORFs? HOT 2
- Input file size HOT 2
- Plasmid name defaults to "plasmid" HOT 2
- Issue with streamlit.cli from conda installation HOT 4
- [Request] Add feature annotations in the .gbk map HOT 2
- AttributeError: module 'streamlit' has no attribute 'cli' HOT 2
- Combined Annotations from pLannotate running locally
- custom database installation
- `st.cache` is deprecated HOT 3
- Installation Issues HOT 1
- adding custom database clarification HOT 6
- Docker container
- Databases not downloaded
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from plannotate.