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3d_cnn_adni_10.1016-j.neuroimage.2019.01.031

ad_classification_vae

Deep spectral-based shape features for Alzheimer’s Disease classification

adaptive-graph-convolutional-network

AGCN - Spectral ChevNet built on Adaptive, trainable graphs

adcortsig-roi

Alzheimer disease cortical signature ROIs and cortical signature thickness measure calculation

adni_3dcnnvstda

This is a summary of the model code used in "Back to the basics with inclusion of clinical domain knowledge - A simple, scalable and effective model of Alzheimer's Disease classification". It comprised the relevant 3D CNNs for hippocampus, patch and full inner brain image subsets, the TDA 2D CNN with relevant dense models to combine models trained on persistence images from different homological dimensions. Moreover, the models (GNN and LR) to combine multiple image patches are included, as well as the data splits in terms of ADNI database patient IDs (partitions).

alzheimer-s-classification-and-visualization-using-convolutional-neural-networks-1

alzheimer-s-classification-using-densenet169

A CNN model to classify Alzeimer's disease in a patient using DenseNet-169 pretrained keras weights

alzheimers-dl-network

A CNN-LSTM deep learning model for prognostic prediction and classification of Alzheimer's MRI neuroimages.

alzheimers_diagnosis_stagedetermination

E6893 Final Project for ja3130, mn2769, and hz2441 (Project ID: 201712-18)

alzheimers_disease_progression

Code for analysis of ADNI data

arduino-lora

An Arduino library for sending and receiving data using LoRa radios.

articles2domains

Pipeline for preprocessing neuroimaging article texts and, with pre-aggregated coordinate data, mapping to domains of brain functino

atten_deep_mil

This is an implementation of ICML 2018 "Attention-based Deep MIL"

awesome-diffusion-models-in-medical-imaging

Diffusion Models in Medical Imaging

benchmarking-gnns

Repository for benchmarking graph neural networks

biopython

Official git repository for Biopython (originally converted from CVS)

brain-gnn-project

brain-mri-autoencoder

Deep Convolutional Autoencoders for reconstructing magnetic resonance images of the healthy brain

brain-networks-course

Repo for Brain Networks course

brain2020

Development and validation of an interpretable deep learning framework for Alzheimer's disease classification

cae

Convolutional Autoencoder applied to CIFAR dataset

camull-net

An implementation of the Cambridge 3D convolutional network for the classification of Alzheimer's disease.

cgcn_fmri

Graph Convolution Network for fMRI Analysis Based on Connectivity Neighborhood

chest_xray_example

The repo contains example notebooks for Chest XRay Transfer Learning Example

cnn-interpretability

🏥 Visualizing Convolutional Networks for MRI-based Diagnosis of Alzheimer’s Disease

cnn_design_for_ad

Code for NeuraIPS2019 ML4H "On the design of convolutional neural networks for automatic detection of Alzheimer's disease"

cnn_graph

Convolutional Neural Networks on Graphs with Fast Localized Spectral Filtering

cnslab_fmri

CNS (Computational Neuroscience) Lab project for age/sex classification of fMRI scans

comparison-of-convolutional-neural-network-training-parameters-for-detecting-alzheimer-s-disease-and

CNN parameter estimation and model tuning using a large neuroimaging dataset with more than 650 MRI scans as well as the generation of class activation and relevance maps.

deeplearninginteractivevis

Interactive visualization of 3D CNN relevance maps