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mengchengyao's Projects

2016_bray_natprot icon 2016_bray_natprot

Supporting data files, documentation, and updated tips for the Cell Painting protocol

2016_wsn_ha_analysis icon 2016_wsn_ha_analysis

流感病毒a HA 分型的相关资料Computer code for the analyses presented in "Accurate Measurement of the Effects of All Amino-Acid Mutations on Influenza Hemagglutinin" (Viruses 2016, 8(6), 155; doi:10.3390/v8060155)

2020_deepis icon 2020_deepis

嵌合T细胞受体Code used for "Deep-learning based three-dimensional label-free tracking and analysis of immunological synapses of chimeric antigen receptor T cells"

2020_wilk_covid icon 2020_wilk_covid

新冠数据与代码Reproducibility repository accompanying Wilk, Rustagi, Zhao, et al. "A single-cell atlas of the peripheral immune response to severe COVID-19"

2021_haghighi_submitted icon 2021_haghighi_submitted

High-Dimensional Gene Expression and Morphology Profiles of Cells across 28,000 Genetic and Chemical Perturbations

ablang icon ablang

AbLang: A language model for antibodies

absolut icon absolut

Unconstrained lattice antibody-antigen bindings generator

activepathways icon activepathways

多组学代谢通路富集Integrative pathway enrichment analysis of multivariate omics data

adolescent-mouse icon adolescent-mouse

小鼠大脑单细胞分析图谱分析流程Analysis pipeline for the adolescent mouse nervous system project

agingmousebrainccinx icon agingmousebrainccinx

单细胞小鼠大脑细胞通讯分析Predicted cell-cell interactions of the aging mouse brain

ananke icon ananke

16s微生物聚类Ananke: Clustering marker gene data by time-series patterns

annotated_deep_learning_paper_implementations icon annotated_deep_learning_paper_implementations

很多深度学习论文复现相关🧑‍🏫 60 Implementations/tutorials of deep learning papers with side-by-side notes 📝; including transformers (original, xl, switch, feedback, vit, ...), optimizers (adam, adabelief, sophia, ...), gans(cyclegan, stylegan2, ...), 🎮 reinforcement learning (ppo, dqn), capsnet, distillation, ... 🧠

antigen.garnish icon antigen.garnish

新生抗原预测Ensemble Antigen Prediction and Quality Analysis from DNA Variants and Proteins in R

archr icon archr

ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)

autogluon icon autogluon

AutoGluon: AutoML for Text, Image, and Tabular Data

awesome-single-cell icon awesome-single-cell

单细胞工具集List of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

awesome-vdj icon awesome-vdj

vdj分析工具集合Tools and databases for analyzing HLA and VDJ genes.

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