Comments (2)
Safe to delete - all of the functionality of registering volumes is now part of image acquisition and reconstruction repos.
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Removed in #6.
from viscy.
Related Issues (20)
- configurable augmentations HOT 1
- Testing the training pipeline
- VS predictions should output the correct voxel_size/scale HOT 2
- Citation for the Mantis paper HOT 1
- Variable input size training and data pooling
- upgrading lightning to >2.0.8 results to trainer issues HOT 4
- clean up viscy cli display
- Layer-wise learning rate decay during fine-tuning
- Implement test time augmentations to avoid high frequency fluctuations
- Three channel output using covnext model HOT 18
- image translation exercise for DL@MBL HOT 1
- Compatibility issues HOT 10
- Contrastive Learning Implementation HOT 1
- Normalization for patches ome-zarr HOT 1
- organize application scripts on GitHub rather than disk
- Illustrative test datasets HOT 4
- Predict module not giving expected output HOT 3
- API for 2D UNeXt2 model construction needs clarity HOT 2
- WIP: refactor contrastive learning code with virtual staining code HOT 4
- Overflow error seen in training and prediction steps
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