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Malisa's Projects

cd1b-restrictedsinglecellanalysis icon cd1b-restrictedsinglecellanalysis

Seurat analysis of single-cell transcriptional profiling data from the antigen-specific T cells sorted from South African adults with active TB.

compass icon compass

Combinatorial Polyfunctionality Analysis of Single Cells

digital-wallet icon digital-wallet

Malisa Smith's submission to the Insight Data Engineering program. Please see README

flowstats icon flowstats

flowStats: algorithms for flow cytometry data analysis using BioConductor tools

gaea icon gaea

Focal point for gathering and analyzing biomedical evidence as a graph

importers icon importers

Files for converting BMEG input data into common format

schema-uml icon schema-uml

Visualize (.avdl and .proto format) schema files as a UML diagram using Graphviz

schemas icon schemas

Work on data models and APIs for Genomic data.

server icon server

A reference implementation of the APIs defined in the schemas repository.

tissuespecificbiomarkers icon tissuespecificbiomarkers

Testing significance of mutational biomarkers on drug sensitivity reported in the literature. Testing the significance of these biomarkers in cell lines comparing performance in tissue reported as well as other tissues.

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