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Name: Modupeore Adetunji
Type: User
Name: Modupeore Adetunji
Type: User
ENCODE ChIP-seq pipeline
converting seaseq to a docker image
Documentation on St. Jude Cloud.
Statistically Significant loops from HiChIP data
HiC-Pro: An optimized and flexible pipeline for Hi-C data processing
Mechanistic integrative analysis of RNA-Seq data
Find and quantify COSMIC mutational signatures across samples
Getting cwl workflow to work with Toil runner
Annotate the location of peaks in terms of important genomic features
parallel-fastq-dump implementation in bash script
NCBI Prokaryotic Genome Annotation Pipeline
This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to obtain robust estimates of the predominant fragment length or characteristic tag shift values in these assays.
qc metrics
dnanexus reorganization option: using your own applet
Somatic indel discovery tool for tumor RNA-Seq data.
SEACR: Sparse Enrichment Analysis for CUT&RUN
development of seaseq
seaseq as a docker image
testing toil installation
TransAtlasDB: an informatics system for transcriptome analysis data
Educational materials for the St. Jude Cloud project.
Community maintained workflows & tools (with examples)
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.