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lyotvincent's Projects

aredci icon aredci

AREDCI offers a solution for evaluating sample-level reproducibility and multiple algorithms for identifying DCIs.

crispr-m icon crispr-m

Optimizing sgRNA Off-Target Effect Prediction Using a Multi-View Deep Learning Network

despot icon despot

Detection of spot-based spatial transcriptomics domains correlating to single-cell profiles

gpsim icon gpsim

the code of GPSim (by Java)

neotcr icon neotcr

NeoTCR: an immunoinformatic database of experimentally-supported functional neoantigen-specific TCR sequences

ontovarsearch icon ontovarsearch

An ontology-based annotation tool and search platform for annotating and browsing VCF data

owl2json icon owl2json

OWL2JSON is a data migration tool from OWL to JSON

pfgi icon pfgi

a bioinformatics fungal pipeline

phiher2 icon phiher2

PhiHER2 model, a phenotype-informed weakly supervised model for HER2 status prediction from pathological images

vine icon vine

a pipeline for virus analysis

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