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Welcome alien overlord! I'm Ludvig Olsen

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I'm an R and python developer with an MSc in Cognitive Science, working as a PhD student at the Department of Molecular Medicine (MOMA) at Aarhus University Hospital. Current projects revolve around detection and localization of cancers from cell-free DNA.

I have worked with deep learning on text at UNSILO and medical imaging data at Cercare Medical.

The goal of my career is to have a very big positive impact on this world of ours! 🌍

R packages

I have developed a set of open source R packages. Feel free to check them out :-)


groupdata2

  • Divide data into groups
  • Create balanced partitions and cross-validation folds
  • Perform time series windowing
  • Balance existing groups with up- and downsampling
cvms

  • Cross-validate regression and classification models
  • Evaluate predictions with a tidy output
  • Extract challenging observations
  • Find baselines for a wide range of metrics
xpectr

  • Generate testthat tests
  • RStudio addins for faster development
rearrr

  • Rearrrange data points
    - center max value, roll elements, shuffle hierarchy, ...
  • Mutate data points
    - rotate, swirl, cluster, roll values, ...
  • Scaling and measuring utilities
    - MinMax scaling, find angle, find centroid, ...

GitHub stats

Ludvig Renbo Olsen's Projects

align-linguistic-alignment icon align-linguistic-alignment

Python library for extracting quantitative, reproducible metrics of multi-level alignment between two speakers in naturalistic language corpora.

bhappyr icon bhappyr

Amusing Sentences Generator. Amusing feedback to lighten the mood of statisticians.

cvms icon cvms

R Package: Cross-validate one or multiple gaussian or binomial regression models at once. Perform repeated cross-validation. Returns results in a tibble for easy comparison, reporting and further analysis.

gapur icon gapur

Hi there 🖖, This is my Github README.

generalize icon generalize

Machine learning tools for running repeated nested cross(-dataset)-validation.

getoldtweets-python icon getoldtweets-python

A project written in Python to get old tweets, it bypass some limitations of Twitter Official API.

griffin icon griffin

A flexible framework for nucleosome profiling of cell-free DNA

groupdata2 icon groupdata2

R-package: Methods for dividing data into groups. Create balanced partitions and cross-validation folds. Perform time series windowing and general grouping and splitting of data. Balance existing groups with up- and downsampling or collapse them to fewer groups.

insertimage icon insertimage

RStudio addin for inserting an image into Markdown with file chooser and copy the image file to the project.

kapre icon kapre

kapre: Keras Audio Preprocessors

liquorice icon liquorice

A tool to detect tissue- and cancer- specific epigenetic signatures in WGS data of liquid biopsies

meg-fmri-group2 icon meg-fmri-group2

MEG and fMRI analysis scripts for study group at Adv. Cognitive Neuroscience, AU.

mosdepth icon mosdepth

fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing

nattrs icon nattrs

Nested attributes/dict members utility functions for python.

nlp_exam icon nlp_exam

Exam project for Natural Language Processing at Aarhus University

pkg_primer icon pkg_primer

R package primer: a minimal tutorial on writing R packages

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