Lucas Sancéré's Projects
BIRL: Benchmark on Image Registration methods with Landmark validations
CARE deep learning AI (CSBDeep) modified and used to denoise and project images of epithelial cells in the context of research at Curie Institute Paris.
CellViT: Vision Transformers for Precise Cell Segmentation and Classification
Image restoration for fluorescence microscopy
A deep learning approach to predicting breast tumor proliferation scores for the TUPAC16 challenge
This repository contains the code necessary in order to reproduce the work contained in the submitted paper: "Segmentation of Nuclei in Histopathology Images by deep regression of the distance map".
Code Implementation for the preprint "Embedding-based Instance Segmentation for Microscopy Images"
A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in Python using Scikit-Learn, Keras and TensorFlow 2.
Simultaneous Nuclear Instance Segmentation and Classification in H&E Histology Images.
HoVer-Net inference code for simultaneous nuclear segmentation and classification
Image J Macros for Curie Users
A concept for using PyTorch Lightning + Hydra
Comparison of Machine Learning models performing pixel-wise classification of extracellular matrix degradation due to modified human cells.
Add customization to OpenMMLab Semantic Segmentation Toolbox and Benchmark.
This is the implementation of Noise2Void training.
Lectures for a napari training course
Deep Learning model to perform binary segmentation of drosophila notum images at cellular scale.
An efficient and elegant inotify (Linux filesystem activity monitor) library for Python. Python 2 and 3 compatible.
Collection of some groovy scripts for QuPath. Public repo but made mostly for personal use.
Segmentation models with pretrained backbones. Keras and TensorFlow Keras.
[ICCV2021] Official PyTorch implementation of Segmenter: Transformer for Semantic Segmentation
Using a U-Net for image segmentation, blending predicted patches smoothly is a must to please the human eye.
StarDist - Object Detection with Star-convex Shapes
unet for image segmentation
Unified Architecture Search with Convolution, Transformer, and MLP (ECCV 2022)
yolo(v3/v4) implementation in keras and tensorflow 2.2