liamhawkins Goto Github PK

autoscraper

A Smart, Automatic, Fast and Lightweight Web Scraper for Python

bio_tools

Small bioinformatic tools I have found/modified/created.

biopython

Official git repository for Biopython (originally converted from CVS)

bitcoin-ticker

A price ticker for Bitcoin. It can send warning email while the price is higher or lower than the threshold you set. Only support btcChina so far.

c-specialization-duke-university

Assignments for the C programming specialization offered by Duke University + Coursera

conserved_mirfinder

Blasts a genome with a list of known miRNA from another species to find potentially conserved miRNA sequences

dotfiles

ebay_data_miner

Data mining Ebay items with some manual input

epitopehunter

Find secret epitopes from blast identities!

fastafinder

Quickly find FASTA sequence using only an accession ID

fastq2fasta

FASTQ to FASTA file converter web interface

git_rbiomir

miRNA-seq analysis package for Storey Lab

mirna-pipeline

MicroRNA-seq pipeline. Raw fastq files in. Analysis and figures of known miRNA out.

mnistkaggle

My submissions to the Kaggle Digit Recognition contest based on the MNIST dataset.

netphosparser

Parse NetPhos 3.1 results and filter against phospho-peptides

nfl-player-stats

Recorded statistics for all football players to ever play in the NFL

opentrons

Software for writing protocols and running them on Opentrons robots

opentrons_protocols

pipettewrapper

Wrap Opentrons multichannel pipette objects to use any number of tips

platetoprotocol

primer_library_scanner

Given a file of mature miRNA sequences, determines if corresponding primers are present in primer library file

pyextract

Converts output from Multiscan and BioTek spectrometers to MPA readable files

quick_primer_blast

Run Primer-BLAST from Chromes right-click menu

revigopy

REVIGO python wrapper

rosalind

socli

Stack overflow command line client. Search and browse stack overflow without leaving the terminal :computer:

sysname_to_gene

Tool for parsing and updating Agilent Xenopus 4x44K microarray SystematicIDs to official gene names