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atacseq

Atac-Seq pipeline

auto-gpt

An experimental open-source attempt to make GPT-4 fully autonomous.

awesome-ggplot2

A curated list of awesome ggplot2 tutorials, packages etc.

beautiful-visualization-with-r

《R语言数据可视化之美》配套代码

bioinfokit

Bioinformatics data analysis and visualization toolkit

bioinformatics123

cbioportal

cBioPortal for Cancer Genomics

ccrcc

Single-Cell Analysis of Immune Cells from Renal Clear Cell Carcinoma

cgatpipelines

Collection of CGAT NGS Pipelines

chip-seq-pipeline

ENCODE Uniform processing pipeline for ChIP-seq

chip-seq-pipeline2

ENCODE ChIP-seq pipeline

chipseq

Chip-Seq pipeline

cnci

Coding-Non-Coding Index (CNCI)

cnmf

Code and example data for running Consensus Non-negative Matrix Factorization on single-cell RNA-Seq data

cpplot

Visualize the results of cell-cell communication analysis

csf_aging_singlecell

Single cell transcriptomics reveals cerebrospinal fluid immune dysregulation during healthy brain aging and cognitive impairment

dolphinnext

A graphical user interface for distributed data processing of high throughput genomics

dolphinnext-docker

Run dolphinnext in a docker image

dolphinnext-tutorial

DolphinNext Tutorial documents

easyfaers

What the Package Does (One Line, Title Case)

easyfaershelp

easymicrobiomer

Using R language in microbiome analysis

enhancedvolcano

Publication-ready volcano plots with enhanced colouring and labeling

enrichment_analysis_celltype

Cell type enrichment analysis using gene signatures and cluster markers

firebrowser

An R client for broads firehose pipeline, providing TCGA data sets

gdc-docs

Official repository for GDC User Guides in Markdown format

geo

gganimate

A Grammar of Animated Graphics

giotto

Single-cell spatial analysis pipeline

goatools

Python library to handle Gene Ontology (GO) terms