Comments (1)
Issue resolved.
import rpy2.robjects as robjects
from rpy2.robjects import r,pandas2ri
pandas2ri.activate()
def convert_datafiles(datasets_folder):
print ("Convert .RData to .csv and clean up files...")
for root, dirs, files in os.walk(datasets_folder):
for name in files:
# sort out .RData files
if name.endswith('.RData'):
name_ = os.path.splitext(name)[0]
name_path = os.path.join(datasets_folder, name_)
# creat sub-directory
if not os.path.exists(name_path):
os.makedirs(name_path)
file_path = os.path.join(root, name)
robj = robjects.r.load(file_path)
# check out subfiles in the data frame
for var in robj:
myRData = r(var)
# convert to DataFrame
if not isinstance(myRData, pd.DataFrame) and not isinstance(myRData, pd.Categorical):
myRData = pd.DataFrame(myRData)
elif isinstance(myRData, pd.Categorical):
myRData = pd.DataFrame({var:myRData})
var_path = os.path.join(datasets_folder,name_,var+'.csv')
myRData.to_csv(var_path)
os.remove(os.path.join(datasets_folder, name)) # clean up
print ("=> Success!")
from applied-predictive-modeling-with-python.
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