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albench

Benchmarking tool for evaluating Active Learning strategies for machine learning

batchbald_redux

Reusable BatchBALD implementation

celldistinguisher

dakota

Fork of https://software.sandia.gov/git/dakota

hdf5

Official HDF5® Library Repository

histomicsdetect

A package for cell detection models using TensorFlow

histomicsml2

A tool for training machine-learning models with whole-slide imaging datasets

histomicsstream

A whole-slide image reader for TensorFlow

histomicstk

A Python toolkit for pathology image analysis algorithms.

histomicsui

A Girder plugin for pathology image annotations and analysis.

itk

Insight Toolkit (ITK) -- Official Repository

itkcolornormalization

Structure preserving color normalization on H&E images using a reference image

itkexamples

Cookbook examples for the Insight Toolkit documented with Sphinx

itkmoduletemplate

A template to start an ITK Module

itkpythonpackage

A setup script to generate ITK Python Wheels

itkpytorch

Implementations of ITK spatially-aware filters in PyTorch

itkremotemodulebuildtestpackageaction

A composite GitHub Action to build, test, and package, ITK remote modules

itksoftwareguide

Sources for the ITKSoftwareGuide.

itkultrasound

ITK module with classes particularly useful for ultrasound.

itkvkfftbackend

VkFFT backends for ITK FFT classes.

lungair-desktop-application

Desktop application for AI-based BPD risk analysis

monai

AI Toolkit for Healthcare Imaging

monai-deploy-app-sdk

MONAI Deploy App SDK offers a framework and associated tools to design, develop and verify AI-driven applications in the healthcare imaging domain.

probability

Probabilistic reasoning and statistical analysis in TensorFlow

seg3d

Seg3D is a free volume segmentation and processing tool developed by the NIH Center for Integrative Biomedical Computing at the University of Utah Scientific Computing and Imaging (SCI) Institute.

simplefractions

slicer

Multi-platform, free open source software for visualization and image computing.

slicersurfacetoolbox

Supports various cleanup and optimization processes on surface models

superpixel-classification

A test cli for classifying superpixels with arbitrary labels

vkfft

Vulkan/CUDA/HIP/OpenCL Fast Fourier Transform library