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Lea Seep's Projects

mc_ensemblecompletness icon mc_ensemblecompletness

In this study we compare the three algorithms for the generation of conformer ensembles Biovia BEST, Schrödinger Prime macrocycle sampling (PMM) and Conformator (CONF) form the University of Hamburg, with ensembles derived for exhaustive molecular dynamics simulations applied to a dataset of 7 small macrocycles in two charge states and three solvents.

openproblems icon openproblems

Formalizing and benchmarking open problems in single-cell genomics

reactionlumping icon reactionlumping

Reaction Lumping procedure for metabolic networks for application with thermodynamic metabolic flux analysis (TMFA)

shiny icon shiny

Easy interactive web applications with R

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