Comments (3)
Also explore BaSiC.
from ashlar.
Can we make use of the tile overlap to additionally constrain (i.e. improve) the correction? This paper might be relevant: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6011154/
from ashlar.
I wanted to follow up if this is still active. If so it might be interesting to reconsider BaSiC as a python version was recently released (https://github.com/peng-lab/BaSiCPy).
from ashlar.
Related Issues (20)
- Add ims reader to ashlar HOT 1
- how to stich jpf file in one. HOT 1
- Stitching output in grey colour. HOT 3
- Is it possible to use different --align-channel for different cycles? HOT 13
- Getting grid like pattern after image stitch many tiff files. HOT 5
- Pyramidal Image Stitching
- tiff reading issue
- using Basic corrected tiles as input for ashlar HOT 2
- Help Wanted - how to input positions in a fileseries HOT 3
- Ashlar fails if ome.tiff data is float32 HOT 2
- option to manage bounds of output image
- ValueError: <COMPRESSION.LZW: 5> requires the 'imagecodecs' package HOT 3
- Misalignment errors HOT 1
- TypeError using conda environment HOT 4
- Parallelizing ashlar HOT 5
- Support of non-regular acquisition grids HOT 5
- ASHLAR registers tiles as cycles/fileseries not working HOT 2
- Error in blending images tile is missing HOT 1
- Failing with 19 channels HOT 1
- stitching error on celldive images HOT 18
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from ashlar.