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api-standards

apps-old

FHIR Client app that supports patient search + launching other FHIR apps

behaviorsim

A framework designed to aid in the implementation of PECS-style agent (based on the work of Bernd Schmidt et al.). This framework is designed to be theory-independent, extensible, and very easy to use. Please see the readme file and wiki page for documentation.

causal_inference_python_code

Python code for part 2 of the book Causal Inference, by Miguel Hernán and James Robins

coder

Classification of Cases into Deterministic Categories

commondatamodel

Definition and DDLs for the OMOP Common Data Model (CDM)

corex

CorEx or "Correlation Explanation" constructs a hierarchy of maximally informative representations of complex data.

courses

Course materials for the Data Science Specialization: https://www.coursera.org/specialization/jhudatascience/1

cyclops

Cyclops (Cyclic coordinate descent for logistic, Poisson and survival analysis) is an R package for performing large scale regularized regressions.

d2l-en

Interactive deep learning book with code, math, and discussions. Available in multi-frameworks.

dat3

General Assembly's Data Science course in Washington, DC

data.table

R's data.table package extends data.frame:

datasciencecoursera

An example repo created for Coursera Data Scientist Toolbox course

datasharing

The Leek group guide to data sharing

exdata_plotting1

Plotting Assignment 1 for Exploratory Data Analysis

gateplugin-python

Python integration for the GATE framework

gettingandcleaningdata

This is a respository for Coursera Getting and Cleaning Data Project

hapi-fhir-based-i2b2-layer

hipsmultimodal

analysis repo for hip fracture deep learning study with multimodal models and case-control radiograph matching

icd

Fast ICD-10 and ICD-9 comorbidities, decoding and validation in R. NB use main instead of master for default branch.

ispn

jamoviguide.com

A quickstart guide for jamovi

jointai

Joint Analysis and Imputation of generalized linear models and linear mixed models with missing values

lavaan.survey

Complex sampling analysis of structural equation models

mplusautomation

The MplusAutomation package leverages the flexibility of the R language to automate latent variable model estimation and interpretation using Mplus, a powerful latent variable modeling program developed by Muthen and Muthen (www.statmodel.com). Specifically, MplusAutomation provides routines for creating related groups of models, running batches of models, and extracting and tabulating model parameters and fit statistics.

opentsdb

A scalable, distributed Time Series Database.

paper15-maper4timeseriesdata

CIKM 2015 - Sarah Masud Preum, John Stankovic, Yanjun Qi (2015) "MAPer: A Multi-scale Adaptive Personalized Model for Temporal Human Behavior Prediction ",

patientlevelprediction

An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.

personality-types

powerlaw