MNIST Example returns difference in predictions: 1.0 about deeplift HOT 7 CLOSED

Btw, I added an example notebook that works on Keras 2 to the keras2compat branch: https://github.com/kundajelab/deeplift/blob/keras2compat/examples/mnist/MNIST_replicate_figures.ipynb - let me know if you have any issues.

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Hi Armen,

Did you load the model using the theano or the tensorflow backend?

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Hi @AvantiShri,
Using TensorFlow backend. Thanks for your prompt response, really enjoyed your talk at Nvidia GTC.

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Are you using the version of DeepLIFT that is on the master branch, or the version that is on the dev-tf branch? The master branch is intended for models trained with the theano backend.

Also, the keras2compat branch is designed for keras 2.0 models, but I have not updated the example notebooks on that branch. Do you specifically want to use keras 1.2? If not, I can prioritize getting the example notebooks on the keras 2.0 branch and just making that into the master branch.

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I'm using master branch. Ultimately, I'm trying to reproduce the examples before doing any further work.

I see, let me try to use theano backend & try to reproduce the MNIST & Genomics example notebooks.

It would be nice to get examples working with keras 2.0, but it's less of a priority so long as I get the above to work. Out of curiosity, have you gotten DeepLift to work w/ Tensorflow backend? If so, were you using Keras 1.2 or 2.0?

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I’ve gotten DeepLIFT to work with the tensorflow backend with both keras 2.0 and keras 1.2. DeepLIFT for keras 2.0 and the tensorflow backend is implemented on the keras2compat branch. DeepLIFT for keras 1.2 with tensorflow is on the dev-tf branch.

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Excellent, thanks for the clarification, I'll give it a test drive.

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