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Name: Kristy Horan
Type: User
Name: Kristy Horan
Type: User
Antimicrobial Resistance Identification By Assembly
A NextFlow pipeline assembler for bacterial genomics
Conda recipes for the bioconda channel.
Introduction to datawrangling with Pandas and trees with ggtree - for MDU
🐻⇔🐨 Calculate distance matrix from ChewBBACA cgMLST allele call tables
ClonalFrameML: Efficient Inference of Recombination in Whole Bacterial Genomes
A simple cgMLST pipeline
A tool for downloading Core Genome MLST schemes for bacterial genomics for use with chewBBACA
Interactive phylogeny trees with Dash
Benchmark datasets for WGS analysis
Vector graphics in Python. Phylogenetic tree diagrams. http://gram.nhm.ac.uk/
health hack repository 2015
In silico serotype prediction for Listeria monocytogenes
Masks recombination as detected by ClonalFrameML or Gubbins and draws an SVG
🔗 A simple nextflow of shovill for running multiple samples at once on multiple cores computer or HPC (i.e. slurm, sge,...)
Pan and zoom events for everybody
Small utility script to submit genomes to PHASTER for phage detection
Load tree format strings via Ajax.
Contextual functions for Phylocanvas
Visual history for Phylocanvas
Display binary data adjacent to tree leaves.
Visual scale-bar for Phylocanvas
Phylocanvas with core plugins preloaded for convenience.
Trying out ideas
Python3 Implementation of SingScore
k-mer based Pipeline to identify the Serotype from Illumina NGS reads
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.