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koryant's Projects

bash-oneliner icon bash-oneliner

Bash Oneliner learning station. This blog will focus on bash commands for parsing biological data, which are tsv files(tab-separated values); some of the commands are for Ubuntu system maintaining. I apologize that there won't be any citation of the code, but they are probably from dear Google and Stackoverflow. Not all the code here are oneliner (if the ';' counts..). English and bash are not my first language, so... correct me anytime, tks!!

cv icon cv

[LaTeX] My academic CV

edges icon edges

Structured Edge Detection Toolbox

gencode_regions icon gencode_regions

Extract 3'UTR, 5'UTR, CDS, Promoter, Genes, Introns, Exons from GTF files

handy icon handy

Some handy python functions for statistics, computation and plotting.

imagej_macros icon imagej_macros

Many years worth of macro scripts for high throughput scientific image processing, deconvolution and quantification

lucy icon lucy

Lucy-Richardson deconvolution

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