Comments (4)
The genlight objects utilize the "show" method for summaries since it's a generic function.
If you want to keep your show method, it shouldn't be too difficult to set summary as generic and then declare it as a method to vcfR.
from vcfr.
Thank you for the example! That helps a lot. I think my current show method is very similar to the head method. So I think I can just rewrite the show method. I'll keep this open, with your link, until I do.
from vcfr.
Additionally, if it pleases you, here's my definition of the "show" method for genclone.
from vcfr.
Simplified the show method for objects of class vcfR.
from vcfr.
Related Issues (20)
- Variants with MAF of 0 after removing monomorphics HOT 6
- Error: ID column contains non-unique names HOT 1
- How can I add population information to genind converted using vcfR2genind? HOT 2
- RStudio Session aborted when writing VCF
- vcfR not recognizing all chromosomes HOT 2
- Heterozygous SNP calling HOT 15
- read.vcfR() coredump with empty lines in input HOT 5
- Rename Genotype information HOT 2
- vcfR2tidy can't handle files with empty INFO HOT 4
- gene/chromosome annotation HOT 2
- write.vcf() not filtering variants HOT 2
- Filtering for minor allele Frequency HOT 4
- Assign_Indiv_by_Geno.R function of Demuxafy.sif problems with the vcf HOT 1
- chromR object not finding DP and MQ values HOT 2
- read.vcfR() not recognizing missing data HOT 3
- extract.gt() missing heterozygotes HOT 1
- compilation issue HOT 2
- Hide a panel from chromoqc or plot HOT 2
- vcfR Subsetting to the first chromosome HOT 1
- change genotype(change gap to NA) HOT 2
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from vcfr.