kmabbott Goto Github PK

baci_glmm

Implementing a Generalized Linear Mixed Effects Model (GLMM) on a Before-After-Control-Impact (BACI) study design related to coastal dune restoration

baikal_sewage

bcgmap

Leaflet based map of fish/bug BCG values for 2018 assessment

biomontools

Tools for biomonitoring and bioassessment; metric calculation for benthic macroinvertebrates, fish, and periphyton.

biostats_mcgarigal

Suite of useful functions for multivariate states written by Kevin McGarigal at UMass

cc-linear-mixed-models

Introduction to linear mixed models

contdataqc

Quality control checks on continuous data. Example data is from a HOBO data logger with 30 minute intervals.

contestreamtemperature

Package for cleaning and analyzing stream daily stream temperature

contestreamtemperature_westbrook

Model of daily stream temperature for the West Brook and its tributaries. Data and code used for the peerJ 2016 Temperature model paper.

freshwaterexplorermodel

Random Forest model, data, and R code for developing the Data Explorer map.

getreal

myrepo

testing my setup

northeast_bkt_occupancy

Northeast Brook Trout Occupancy Model

r-streams

R scripts to assess stream ecological integrity

sbtools

Tools for interfacing R with ScienceBase data services

streamtemp_classification

This repository contains the data and code used to develop the thermal regime classification analysis in Willis et al. (2021). Associated paper can be accessed at PLOS ONE.

streamthermal

temperaturedb

Data management system used to create SQLite DB, store and clean river/stream temperature logger data and calculate temperature metrics