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贾凯华's Projects

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Hello world.

a-pro icon a-pro

ASTRAL for PaRalogs and Orthologs

agat icon agat

Another Gff Analysis Toolkit

assemblytics icon assemblytics

Assemblytics is a bioinformatics tool to detect and analyze structural variants from a genome assembly by comparing it to a reference genome.

beast2 icon beast2

Bayesian Evolutionary Analysis by Sampling Trees

collinearity icon collinearity

scripts to parse and analyse MCScanX collinearity output

construct icon construct

method for modeling continuous and discrete population genetic structure

copytranslator icon copytranslator

Foreign paper reading and translation assistant based on copy and translate.(Latest: v0.0.7-Kylin-RC1)

deepmod icon deepmod

DeepMod: a deep-learning tool for genomic-scale, strand-sensitive and single-nucleotide based detection of DNA modifications

densitymap icon densitymap

DensityMap is perl tool for the visualization of features density along chromosomes

diffany icon diffany

Diffany is an open-source toolbox for calculating and visualizing differential networks.

download icon download

🔴蓝灯最新版本下载 https://github.com/getlantern/download 🔴 Lantern Latest Download https://github.com/getlantern/lantern/releases/tag/latest 🔴

dupgen_finder icon dupgen_finder

A pipeline used to identify different modes of duplicated gene pairs

edta icon edta

Extensive de-novo TE Annotator

findgse icon findgse

findGSE is a tool for estimating size of (heterozygous diploid or homozygous) genomes by fitting k-mer frequencies iteratively with a skew normal distribution model.

freebayes icon freebayes

Bayesian haplotype-based genetic polymorphism discovery and genotyping.

gemma icon gemma

Genome-wide Efficient Mixed Model Association

genomegamap icon genomegamap

Within-species genome-wide dN/dS estimation from very many genomes

gffread icon gffread

GFF/GTF utility providing format conversions, region filtering, FASTA sequence extraction and more

gfwdata icon gfwdata

个人收集整理科学上网的资料,保持更新

gpt_academic icon gpt_academic

为ChatGPT/GLM提供图形交互界面，特别优化论文阅读/润色/写作体验，模块化设计，支持自定义快捷按钮&函数插件，支持Python和C++等项目剖析&自译解功能，PDF/LaTex论文翻译&总结功能，支持并行问询多种LLM模型，支持清华chatglm等本地模型。兼容复旦MOSS, llama, rwkv, 盘古, newbing, claude等

hosts icon hosts

镜像：https://coding.net/u/scaffrey/p/hosts/git

inspector icon inspector

A tool for evaluate long-read de novo assembly results

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