Name: Kewalin Samart
Type: User
Company: University of Colorado Anschutz Medical Campus
Bio: PhD student in Comp Bio at CU Anschutz | BSc Comp Math/ CMSE Michigan State '22
Twitter: KewalinSamart
Location: Denver, Colorado
Blog: orcid.org/0000-0003-3134-8846
Kewalin Samart's Projects
Workshop: Intro to Version Controlling (git) with R
RMarkdown for Reproducible Research | Spring 2020 Workshop
Canonical Correlation Analysis Zoo: CCA, GCCA, MCCA, DCCA, DGCCA, DVCCA, DCCAE, KCCA and regularised variants
Installing multiple CDF packages from BrainArray: http://brainarray.mbni.med.umich.edu/Brainarray/Database/CustomCDF/CDF_download.asp
RStudio Cheat Sheets
R
Building a model to simulate how blood cells repopulate oxygen in the body
CMSE 202 repository for "Git"-ing practice with Git collaboration.
From a population of solutions for a given set of loci, score the genes on the loci using the method in Tasan et al.
Implement the genetic algorithm from Tasan et al. and integrate with previous submissions to provide a solution to the 2018 prelim.
Kewalin Samart's current curriculum vitae
A repo for my curriculum vitae/resume
Differential gene expression analysis based on the negative binomial distribution
Fast Gene Set Enrichment Analysis
liver cancer project
This repository has teaching materials for a 2-day Introduction to RNA-sequencing data analysis workshop using the Orchestra Cluster.
Janani Ravi's Research Group
some of KS's undergrad computational coursework
R-Ladies East Lansing meetup presentations, resources, photos & such!
MIT Deep Learning Book in PDF format (complete and parts) by Ian Goodfellow, Yoshua Bengio and Aaron Courville
A unified multi-task learning framework for prediction of individualized tissue gene expression profiles.
Data processing for NF1 Schwann cell pilot images.
Source code for 'Numerical Python Second Edition' by Robert Johansson
Distill-flavoured R Markdown for Scientific Manuscripts
Shiny Dashboards Workshop for R-Ladies Philly
[WIP] R Markdown Cookbook. A range of tips and tricks to make better use of R Markdown.
RNA-seq workflow: gene-level exploratory analysis and differential expression
LaTeX Journal Article Templates for R Markdown