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Hi there πŸ‘‹ 😊

My name is Kewalin Samart (she/her/hers), a Ph.D. student in Computational Bioscience πŸ§¬πŸ’»πŸ“ˆ at University of Colorado School of Medicine. I earned a B.Sc. in Computational Mathematics from Michigan State University in 2022. My research interests include Computational and Statistical Genomics with a focus on method development. I am currently developing and applying machine learning approaches to discover novel therapeutic indications for infectious diseases.

Apart from doing science and coding, I love to hike πŸ₯ΎπŸ”, bike 🚲, sing, listen to music πŸ’•, and walk Coco πŸ•, a cute little Goldendoodle boy.

Meet Coco πŸ€— πŸ‘€

βœ‰οΈ Find me on:

Python Python Python Python Python

Kewalin Samart's Projects

cca_zoo icon cca_zoo

Canonical Correlation Analysis Zoo: CCA, GCCA, MCCA, DCCA, DGCCA, DVCCA, DCCAE, KCCA and regularised variants

cdfpackages_installation icon cdfpackages_installation

Installing multiple CDF packages from BrainArray: http://brainarray.mbni.med.umich.edu/Brainarray/Database/CustomCDF/CDF_download.asp

cpbs7711_module3 icon cpbs7711_module3

From a population of solutions for a given set of loci, score the genes on the loci using the method in Tasan et al.

cpbs7711_module4 icon cpbs7711_module4

Implement the genetic algorithm from Tasan et al. and integrate with previous submissions to provide a solution to the 2018 prelim.

deseq2 icon deseq2

Differential gene expression analysis based on the negative binomial distribution

fgsea icon fgsea

Fast Gene Set Enrichment Analysis

intro-to-rnaseq-hpc-orchestra icon intro-to-rnaseq-hpc-orchestra

This repository has teaching materials for a 2-day Introduction to RNA-sequencing data analysis workshop using the Orchestra Cluster.

mtm icon mtm

A unified multi-task learning framework for prediction of individualized tissue gene expression profiles.

rmarkdown-cookbook icon rmarkdown-cookbook

[WIP] R Markdown Cookbook. A range of tips and tricks to make better use of R Markdown.

rnaseqgene icon rnaseqgene

RNA-seq workflow: gene-level exploratory analysis and differential expression

rticles icon rticles

LaTeX Journal Article Templates for R Markdown

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