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Csaba Kerepesi's Projects

aging_ml icon aging_ml

Prediction and characterization of human ageing-related proteins by using machine learning. Related publication: https://doi.org/10.1038/s41598-018-22240-w

amphoravizu icon amphoravizu

Chart visualization for metagenomics analysis tools AMPHORA2 and AmphoraNet. Related publication: http://dx.doi.org/10.1007/s00248-014-0502-6

brain-graph-tools icon brain-graph-tools

Tools for data mining of brain graphs. Related publication: http://dx.doi.org/10.1007/s11571-017-9445-1

mistimm icon mistimm

MiStImm: an agent-based simulation tool to study the self-nonself discrimination of the adaptive immune response

mouseagingclocks icon mouseagingclocks

Workflows for measuring epigenetic age of mouse RRBS samples. Genomic and rDNA epigenetic aging clock.

translocatome_ml icon translocatome_ml

Translocatome is a novel resource for the analysis of protein translocation between cellular organelles. Using the gradient boosting machine learning tool, XGBoost, Translocatome provides translocation probability values for 13,066 human proteins identifying 1133 and 3268 high- and low-confidence translocating proteins, respectively.

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