Keith Schulze's Projects
Filter for generating image thumbnails and storing metadata for MyTardis using LOCI Bioformats
Summary and presentation for BioInfoSummer introduction to image processing and analysis workshop. This is intended to be built with GitBook (http://gitbook.io).
A collection of plugins for bone image analysis in ImageJ
Lightweight, modular, and extensible library for functional programming.
Constrained categories
Python package to interchange between different spatial coordinate systems.
core.matrix : Multi-dimensional array programming API for Clojure
Simple dotfiles
A reference architecture for deploying containerized microservices with Amazon ECS and AWS CloudFormation (YAML)
Code, exercises, answers, and hints to go along with the book "Functional Programming in Scala"
Compositional, streaming I/O library for Scala
SBT/Giter8 template for multi-project functional Scala projects
Home Tap repo for extra formulas
Giter8 template for creating ImageJ plugins in Jython
:sparkler: Open scientific N-dimensional image processing :microscope:
ImageJ-specific applications of the SciJava script languages
R package for image processing
A generic next-generation Java library for image processing
Lightweight Scala kernel for Jupyter / IPython 3
declarative and reproducible Jupyter environments - powered by Nix
My website
Home of my blog
Lambda syntax for Scala EDSLs
Scala library and ImageJ/Fiji plugins for preprocessing and conversion of data from early Lattice light-sheet microscope implementations
Monash Micro Imaging super-resolution microscopy by STORM workshop
MyTardis - a data management system for private lab/facility data