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Name: Kinghorn Centre for Clinical Genomics
Type: Organization
Name: Kinghorn Centre for Clinical Genomics
Type: Organization
Robust detection of clinically relevant structural and copy number variation from whole genome sequencing data
CloudBioLinux: configure virtual (or real) machines with tools for biological analyses
A tool for fetching nanopore fast5 files after filtering via demultiplexing, alignment, or other, to improve downstream processing efficiency
Intro to R and RStudio for Genomics
Genomics formulae for the Homebrew package manager, brew.sh
IGV server for DNAnexus data
mity: A highly sensitive mitochondrial variant analysis pipeline for whole genome sequencing data
Affinity is a service equipped with Lucene and Luwak for active ontology search hits
Phenomics annotation and search suite
Phenomics code and Jenkins dev-ops setup
The Monarch HIPPO: Deriving insight from the medical literature by fuzzy semantic searches over diseases and phenotypes.
Amazon Lambda function to fetch, clean and dispatch latest pubmed articles for annotation.
A java dcokerized runnable scheduled to perform subscribed searches and send notifications
This is an early version of POREquality, an R Markdown document designed to be ran as part of a Nanopore local basecalling pipeline.
RAGE-seq scripts
KCCG's cloud-based, genome analysis pipeline
Seave is a web platform that enables genetic variants to be easily filtered and annotated with in silico pathogenicity prediction scores and annotations from popular disease databases. Seave stores genomic variation of all types and sizes, and allows filtering for specific inheritance patterns, quality values, allele frequencies and gene lists. Seave is open source and deployable locally, or on a cloud computing provider, and works readily with gene panel, exome and whole genome data, scaling from single labs to multi-institution scale.
SQL files required to set up the Seave database schema and scripts to import data from annotation sources into the Seave MySQL annotation databases.
Documentation for how to use and administrate a Seave installation.
Annotation database generated from UCSC, using CCDS (Consensus CDS IDs)
dx Asset bundle, supporting VCFscope
Measure the performance of a genomic analysis pipeline
VCFscope report generation app.
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.