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brainiak

Brain Imaging Analysis Kit

cili

cili - bring your eye tracking data into focus

contort_dnn

Adapting Deep Network Features to Capture Psychological Representations

dcm2niix

dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC

gcmi

Functions for calculating mutual information and other information theoretic quantities using a parametric Gaussian copula.

jemdoc2.0

Revision to jemdoc originally written by Jacob Mattingley

kbraunlich.github.io

kpreproc

Toolbox for preprocessing fMRI data with SPM8

lovebc.github.io

Website for @lovebc http://bradlove.org

macapype

PNH segmentation pipelines based on nipype

mre

Multiple Relational Embedding

mri2mri

neuroimaging_pattern_masks

nilearn

Machine learning for NeuroImaging in Python

nistats

Modeling and statistical inference on fMRI data in Python

pretrained-models.pytorch

Pretrained ConvNets for pytorch: NASNet, ResNeXt, ResNet, InceptionV4, InceptionResnetV2, Xception, DPN, etc.

psychopy

For running psychology and neuroscience experiments

pycm

Multi-class confusion matrix library in Python

pylinkwrapper

API for using Psychopy with Pylink for EyeLink

pymanopt

Python toolbox for optimization on Riemannian manifolds with support for automatic differentiation

pymc4

Experimental PyMC interface for TensorFlow Probability. Official work on this project has been discontinued.

pypreclin

rational-models-of-categorization

Implements Anderson (1991)'s rational model and a few of its successors.

sea

Sampling Emergent Attention

t1ify

Applying style transfer to convert multi-modal MRI images to have a T1 like contrast.

tikhonov

code for L2 regularization of arbitrary Tikhonov matrices

turingtutorials

Educational material and tutorials for the Turing language