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Hi πŸ‘‹ welcome,

Here you can find a brief, yet complete, overview of my background. For a summary of links to various online profiles, you can check out my linktree. First things first, some personal promo! 😎
Check out my image tiling library plakakia and my latest streamlit app demos for #image and #signal for processing. Let me know if they're sleeping :)

Bio - AI & Machine Learning Research Scientist πŸ‘¨β€πŸ’»

TL;DR: A computational scientist specializing in AI & ML, combining backgrounds in Computer Science, Machine Learning, and Bioscience Engineering. With hands-on experience in analyzing neurophysiological data using Neural Networks and developing AI software solutions in a startup, I served as a Postdoc Researcher at KU Leuven's MeBioS Biophotonics Group, continuing after PhD tenure, overseeing insect-monitoring and agri-food projects, mentoring PhD researchers, MSc/BSc students, managing the lab's data and software, plus fostering AI adoption across diverse present and potential future projects. Now, I'm taking my expertise to new heights as a remote sensing & AI researcher at Vito. My current role involves classifying the earth's land cover in a reliable and accurate way through the LCFM project of the EU commission (JRC). This important work has real-world applications for environmental conservation, land use planning, and climate change mitigation.

πŸŽ“ Studies

I studied Computer Science in the Aristotle University of Thessaloniki (Greece πŸ‡¬πŸ‡·) earning a solid basis around computing theory. Next, I finished my Master's in Machine Learning at KTH University (Stockholm, Sweden πŸ‡ΈπŸ‡ͺ) specializing in Computational Neuroscience (Spiking Neural Networks). For my thesis work, I simulated a small piece of the neocortex using the NEST simulator in Python to compare various columnar structure types and their activity.

🧠 Deep Learning in Neurophysiology at KUL (PhD researcher)

As a PhD researcher in the lab of Neurophysiology of KU Leuven for 2 years, I conducted in-depth studies on deep Convolutional Neural Networks and their resemblance to the visual system. My work ([1][2][3][4]) included complex computer vision and regression tasks for predicting biological neuronal activity based on artificial neuron activations of various SOTA CNN models, leading to 4 scientific publications in renowned Neuroscience journals and a poster presentation at VSS conference (Florida, USA), before exiting the programme.

πŸš€ Applied AI at Faktion (Data Scientist)

Having developed a passion for #Deep-Learning and its software ecosystem, I wanted to shift my focus from fundamental research to applied AI applications for which I could more clearly gauge their societal impact. Working as a Data Scientist at Faktion in Antwerp, I honed my skills in industry practices such as end-to-end ML pipelines, AI model training, Docker containers, and Cloud components. Notably, my team and I won a hackathon on Activity Recognition in video data, organized by Vinci Energies.

🐞 Data-centric AI at MeBioS, KUL (PhD researcher)

Motivated to pursue more applied research this time, and be closer to home, I returned to Leuven (and KUL) to obtain my #PhD in Bioscience Engineering. My thesis topic was Optical Insect Identification using Artificial Intelligence and focused on 2 distinct insect recognition tracks based on:

  1. images, using Computer Vision,
  2. time-series (wingbeats), using Signal Processing.

The main objectives of my research were around data-centric AI and strict model validation to reveal the "true" model performance once deployed in the field. During my PhD I have developed software tools, GUIs (#Streamlit, #Tkinter) and AI models which ran on #IoT (e.g., RaspberryPi) devices, Linux/Windows desktops, and the cloud (#AWS). My latest achievement is a Streamlit & #FastAPI server that runs on AWS and serves our image classification model to external companies and collaborating research institutes (examples of device and software: 1, 2). Apart from the API, it incorporates a user-friendly GUI to aid researchers with image annotation tasks.

🦾 Postdoctoral Researcher at MeBioS, KUL

As a Postdoctoral researcher at MeBioS (KUL), I got involved in multiple projects around AI in insect monitoring or agrifood applications. I guided PhD researchers and built software tools that aided in their research. Being more involved in Hyperspectral Imaging (#HSI) projects, I familiarized myself with SOTA techniques to deal with complex hypercube data using AI. Moreover, I was the research data and software manager for our lab, being responsible on hosting and sharing our software/data using KUL's infrastructure and maintaining our research group's #GitLab (here's its public profile, where you can see some of its content).

πŸ›°οΈ Remote Sensing & AI Researcher at Vito

Now, I'm taking my expertise to new heights as a remote sensing & AI researcher at Vito. My current role involves classifying the earth's land cover in a reliable and accurate way through the LCFM project of the EU commission (JRC). This important work has real-world applications for environmental conservation, land use planning, and climate change mitigation.

By staying up-to-date with technological advancements, my commitment is to make meaningful contributions to the field of pattern recognition. Let's collaborate to create practical solutions that have a real impact! πŸ”§

Contact

🌱 I’m always interested to learn about how Artificial Intelligence can improve our lives.
πŸ’¬ Do you want to reach out? Send an email at kalfasyan[at]gmail[dot]com
πŸ”— Check my linktr.ee

πŸ“š Researcher profiles:
🧬 orc-id
πŸ”¬ Google Scholar
πŸ“– ResearchGate

🌐 Stay connected through the following social media channels:
πŸ“² X/Twitter
πŸ“² LinkedIn
πŸ“² GitHub

Yannis Kalfas's Projects

custom_object_detection_docker icon custom_object_detection_docker

This repository creates a docker image (singularity support soon) to train an object detection system on 1 class using Tensoflow's object detection API.

hubpower icon hubpower

Control the power settings for a USB hub

image_bbox_slicer icon image_bbox_slicer

This easy-to-use library is a data transformer sometimes useful in Object Detection and Segmentation tasks. With only a few lines of code, one can slice images and their bounding box annotations into smaller tiles, both into specific sizes and into any arbitrary number of equal parts. The tool also supports resizing of images and their bounding box annotations, both by specific sizes and by a resizing/scaling factor.

impy icon impy

Impy is a Python3 library with features that help you in your computer vision tasks.

kivy icon kivy

Open source UI framework written in Python, running on Windows, Linux, macOS, Android and iOS

nicegui icon nicegui

Create web-based UI with Python. The nice way.

pimoroni_sensors_pi icon pimoroni_sensors_pi

Reading and saving pimoroni enviroplus / enviro+ sensor data using Python and a Raspberry Pi.

plakakia icon plakakia

Python image tiling library for image processing, object detection, etc.

prospector icon prospector

Inspects Python source files and provides information about type and location of classes, methods etc

pyflakes icon pyflakes

A simple program which checks Python source files for errors

pynest-indieproject icon pynest-indieproject

probably something like this...DD2402 Advanced Individual Course in Computational Biology

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