Name: Chengxin Zhang
Type: User
Company: University of Michigan
Bio: Bioinformatics algorithm development for protein and RNA structure prediction, function annotation, structure alignment and interaction prediction.
Location: Ann Arbor
Blog: https://zhanggroup.org/people/zcx/
Chengxin Zhang's Projects
CAFA baseline methods
Conversion of PDBx/mmCIF files to best effort/minimal PDB files
Evaluating the feasibility of extending CAFA to larger dataset
Combinatorial Extension (CE)
scripts to evalulate COFACTOR GO prediction accuracy
scripts to update template library for COFACTOR
Tool for searching proteins through structural fingerprints.
forked from https://github.com/largelymfs/deepcontact
A simple LAMP image using Ubuntu, Apache, PHP and MySql in a single image with CGI support
The DSSP building software
Generate Mapping File between UniProt Accession, Gene Name, and b-number
A fork for the old hhsuite-2.0.16
BioLiP2 database curation and web interface
Modification profiling with Marathon RT
utilties for parsing FASTA and PSICOV format multiple sequence alignment
legacy blast
Fast and easy contact prediction.
implementing PDB to FASTA file format conversion in multiple languages
c++ programs for parsing PDB files
Protein data compressor
GO prediction by STRING protein-protein interaction