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followers: 8.0 following: 13.0 repos: 22.0 gists: 0.0

Name: Justin Xu

Type: User

Company: Stanford Center for Artificial Intelligence in Medicine & Imaging (AIMI)

Bio: PhD Candidate @ Oxford | Fulbrighter @ Stanford

Twitter: JustinX13601

Location: Palo Alto, CA

Blog: justin13601.github.io

• Per aspera ad astra •

👨‍💻 About

Resourceful, results-driven, and dedicated data scientist. Trained as a biomedical engineer. Looking to leverage my professional skills and passions for clinical AI and machine learning in healthcare!

🛠️ Languages, Tools, and Frameworks

🌱 Projects

ACES: Automatic Cohort Extraction System for Event-Streams.
AnnoDash: A clinical terminology annotation dashboard supported by LLMs for standardized ontology mapping of patient health records.
VA-SDoH: Using BERT/RoBERTa NLP transformers on verbal autopsy datasets for sequence classification of social determinants of health.
pLGG: Radiomics and 3D ResNets for pretherapeutic MRI differentiation of BRAF status in pediatric low-grade gliomas.
EPAI: NLP sentiment analysis of tweets.

🤝 Acknowledgements

Alistair Johnson, DPhil | The Hospital for Sick Children
Matthew McDermott, PhD | Harvard Medical School
Jennifer Hon, BDS, MBBS | Harvard Medical School
Leo Anthony Celi, MD, MPH | MIT Laboratory for Computational Physiology
Tristan Naumann, PhD | Microsoft Research Health Futures
Farzard Khalvati, PhD | University of Toronto
Hon S. Leong, PhD | Sunnybrook Health Sciences Centre
David Goertz, PhD | Sunnybrook Health Sciences Centre
Emmanuel Chérin, PhD | Sunnybrook Health Sciences Centre

Justin Xu's Projects

aces

ACES: Automatic Cohort Extraction System for Event-Streams

ai-shading

Machine Learning to Predict Solar Irradiance (AI Shading)

aialpha

Use unsupervised and supervised learning to predict stocks

aicancer

A Machine Learning Classifier for Lung & Colon Cancer Histopathological Images.

annodash

A clinical terminology annotation dashboard created using Plotly Dash & the MIMIC-IV database.

betterchatgpt

An amazing UI for OpenAI's ChatGPT (Website + Windows + MacOS + Linux)

dvh-analytics

A DICOM Database Application for Radiation Oncology

dvh_calculation

eventstreamgpt

Dataset and modelling infrastructure for modelling "event streams": sequences of continuous time, multivariate events with complex internal dependencies.

justin13601

Config files for my GitHub profile.

loinc_descriptions

loinc_snomed_embeddings

Embeddings for LOINC & SNOMED CT Codes and Descriptions

mlstocks

oligonnv2

In silico testing of neural network to analyze gene expression profiles and classification of viral diseases

plgg_fusion_net

Radiomics & 3D Residual Neural Networks for Pretherapeutic MRI Differentiation of BRAF Status in pLGGs

project_image_processing

Simple Image Processing Application (ICS4U) - C#

project_magnifying_glass

Magnifying Glass (PC Hack 2018) - C#

project_pac_man

Pac Man Arcade Game Re-creation (ICS4U) - C#

project_pong

Pong Arcade Game (PointClickCare) - C#

project_snakes_and_ladders

Snakes and Ladders Board Game Re-creation (ICS3U) - C#

related_ontologies

A package to generate related clinical ontologies (LOINC, SNOMED-CT).

savings.io

A Savings Webapp that Helps Students Strategically Save Towards an Emergency Fund and Suggests Investments Based on an ML Sentiment Analysis Algorithm.

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