juanvesga Goto Github PK

allindia

An All India TB Transmission model , to assess interventions at the national level. DS-MDR , HIV and Diabetes melllitus components are included

cchf

cchfv-vaccine-trial-multicountry

R code for transmission models of CCHF calibrated to TKY, AFG and SA data. Accompanies the publication in Vaccine

datasharing

The Leek group guide to data sharing

euro_covid_tb

Simple MDRT-TB transmission model for Euro region. Intended for assessing impact of covid in eastern europe

gtbreport2022

WHO Global Tuberculosis Report 2022

hivmodel_belize

Compartmental transmission model for HIV transmission in Belize. This C++ code runs a calibration procedure using MCMC, using Belize's target data. The model allows an age and risk stricture and several interventions.

ide-modelling-r-ankara

Host site for the IDE modelling in R course, Ankara 2023

ide-modelling-r-ankara-turkish

Host site for the Turkish Short course on infectious disease modelling in R, Ankara 2023

india-subnational-tbmodel

TB transmission model for India districts. Fit models to local data and simulates packages of interventions

learn

RECON learn: a free, open platform for training material on epidemics analysis

libsoda

LSODA solver in C++

my-first-binder

norovirus

Norovirus transmission model for the UK: Age structured, two strain circulation dynamics

r-training

R training

return-on-investment-of-tb-screening-and-prevention

taller_tb

tb-preventive-therapy-south-africa

TB transmission model exploring target product profiles of TPT of future regimens, applied to ZAF

tb_workshop

tbpractical

TB practical for Bogota short course 2019: Compartmental model of TB transmission simulating an equilibrium epidemic and plausible interventions to reach elimination

tbscreening_tool

shiny app for calculating and displaying CEA of LTBI screening among immigrant populations

who_euro

Regional and country level TB models for End TB roadmap