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aind-data-schema

allensdk

awesome-neural-data-tools

Tools, algorithms, and frameworks for managing and analyzing neural data.

awesome-neuropixels

bonsai

The compiler, IDE, and standard library for the Bonsai visual programming language for reactive systems

bonvision

BonVision is an open-source closed-loop visual environment generator developed by the Saleem Lab and Solomon Lab at the UCL Institute of Behavioural Neuroscience in collaboration with NeuroGears.

brain_observatory_examples

Gallery of visualizations and analyses of the Allen Brain Observatory

brainrender

a python based software for visualization of neuroanatomical and morphological data.

ccf_registration_2020

CCF Registration Competition 2020

channel-map-generator

Automatically generate Channel Map config files using the `probeinterface` library

chronux

Open-source software for neural data analysis (v2.10)

datajoint-python

Relational data pipelines for the science lab

deepinterpolation

desktop

Simple collaboration from your desktop

element-array-ephys

DataJoint Element for Extracellular Array Electrophysiology - NIH U24

ephys-framework-tests

figurl-tiled-image

View a tiled image using deck.gl

grid-viewer

Visualize 2D electrode arrays in the Open Ephys GUI

hdmf

The Hierarchical Data Modeling Framework

jitter

Practical and simplified version of jitter method based on Harrison and German, 2009

juce

JUCE is an open-source cross-platform C++ application framework for desktop and mobile applications, including VST, VST3, AU, AUv3, RTAS and AAX audio plug-ins.

kilosort

Fast spike sorting with drift correction for up to a thousand channels

marble-diagrams

A collection of marble diagrams of various Rx combinators in standalone TikZ format.

nix

Neuroscience information exchange format

nstat

"neural Spike Train Analysis Toolbox" using point-process GLM methods

nwb-explorer

NWB Explorer is a web application to visualise and analyse the content of NWB:N 2 files

nwb_hackathons

Repository for collecting materials from nwb hackathons

onix-docs

Documentation for ONIX, the next-generation Open Ephys Acquisition System

open-hardware-manuscript

Manuscript materials for Current Opinion in Neurobiology article

plugin-dev-workshop

Open Ephys Plugin Development workshop demo