joshuaar Goto Github PK

akka_example

alarc-scripts

scripts for processing transcriptomic data

algorithm-practice

single file algorithm examples in various languages

angularstuff

Random AngularJS related things

breeze

Breeze is a numerical processing library for Scala.

cim-scripts

scripts for working with peptide microarray data. Depends on RegexDBSearch (for now))

dotfiles

my dotfiles for linux

estcc

geocode

command line access to google's GeoCoding service. Keeps within Google's daily limit and saves spot in address list.

gprconvert

gridsearch

Monte Carlo simulation of metrics on path search through an N-Dimensional space.

httpparser.jl

Julia wrapper for joyent/http-parser

jdbc.jl

Julia interface to Java database drivers

joshuaar.github.com

mincut

Monte Carlo algorithm for finding min cuts in graphs. Uses OpenMP.

neural-network-backprop

pandas

Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more

primarch

proteomemotiffinder

Search for regular patterns in bacteria or viral proteomes.

protomapper-search

hassle free search of biological databases for sequence patterns

protomapper-serve

Play server/API for protomapper

protomapper-ui

user interface for protomapper pattern search engine

puppet-example

puppet stuff

push-to-gcr-github-action

An action that build docker image and push to Google Cloud Registry.

resume

My resume

rsem

RSEM: accurate quantification of gene and isoform expression from RNA-Seq data

rudp_share

Software for reliably sharing files across NATs using UDP. Written with Scala/Akka. Uses a custom built peer to peer protocol mediated by a central server.

searchmyblast

simple command line keyword search for XML formatted blast results

sparkstats

Fooling around with some stats in Apache Spark

trackerapp

Helps computers find eachother. Used with RUDP_Share