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connected-components-3d

Connected components on discrete and continuous multilabel 3D & 2D images. Handles 26, 18, and 6 connected variants.

cross-section

Tools for computing properties of cross sections of 3D voxelized images.

crypto-trading-ai-bot-basic

dijkstra3d

Dijkstra's Shortest Path for 6, 18, and 26-Connected 3D (Volumetric) Image Volumes

dlisio-notebooks

euchar

Compute Euler Characteristic curves and surfaces of image and point data.

euclidean-distance-transform-3d

Euclidean distance & signed distance transform for multi-label 3D anisotropic images using marching parabolas.

fast-neural-style-pytorch

Fast Neural Style Transfer implementation in PyTorch :art: :art: :art:

fastmorph

Multilabel and Grey 3D morphological image processing functions. Dilate, Erode, Opening, Closing.

fastremap

Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.

fill_voids

Fill holes in binary 2D & 3D images fast.

force-2020-machine-learning-competition

the results, code and the data for the Force 2020 Machine learning competition after the completion of the competition in October 2020.

g2s

A flexible MPS framework

geoscience-ml-tutorial

Some simple tutorials about machine learning / deep learning / optimization in geosciences.

image-super-resolution-via-iterative-refinement

Unofficial implementation of Image Super-Resolution via Iterative Refinement by Pytorch

joaoponte-page

My personal web page ;)

kimimaro

Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)

literatura-alema

Circulação de literatura ficcional em língua alemã no Brasil do século XIX

medical-to-micro-ct

Repository with part of the code used on the paper "Generation of μCT images from medical CT scans of carbonate rocks using a diffusion-based model"

neupy

NeuPy is a Tensorflow based python library for prototyping and building neural networks

neuroglancer

WebGL-based viewer for volumetric data

petropy

A petrophysics python package for geoscience python computing of conventional and unconventional formation evaluation. Reads las files and creates a pandas dataframe of the log data. Includes a basic petrophysical workflow and a simple log viewer based on XML templates.

pycudashieldtablet

PyCUDA on the NVIDIA Shield Tablet and Google Pixel C

python-bootcamp-for-geoengineers

Python source codes and notebooks from my courses I've given to SPEs and in Marietta College, Ohio, US

pytorch_multi_input_example

Multi-Input Deep Neural Networks with PyTorch-Lightning - Combine Image and Tabular Data

short-course-mps

simpleelastix

Multi-lingual medical image registration library

simpleeq

The code for the SimpleEQ C++ Plugin Project featured on FreeCodeCamp YT channel

smartlife

somoclu

Massively parallel self-organizing maps: accelerate training on multicore CPUs, GPUs, and clusters