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Jessica Vera, Ph.D.'s Projects

bio-script-library icon bio-script-library

Personal library of perl scripts developed and used during graduate school and postdoctoral research. Includes basic bioinformatics-driven tools for working with BED and FASTA files.

dtflow icon dtflow

a new method for inferring and visualizing dynamic cellular trajectories from single-cell data

flowai icon flowai

modifications to flowAI package

jasmine icon jasmine

Single cell RNAseq Signature scoring

jk_grcz11_snv icon jk_grcz11_snv

documenting pipeline for SNV discovery from whole-exome sequencing in zebra fish

pepmeld icon pepmeld

Peptide Microarray Workflow. Python, open-source

scdeed icon scdeed

Single-cell dubious embedding detector (scDED): a statistical method for detecting dubious non-linear embeddings

scenic icon scenic

SCENIC is an R package to infer Gene Regulatory Networks and cell types from single-cell RNA-seq data.

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