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jmmut's Projects

biodata icon biodata

Java library that models biological entities and their equivalents in different file formats typically used in bioinformatics

bioengineer icon bioengineer

Game about automating terraformation in 3D maps, ant-style.

bioinfo-libs icon bioinfo-libs

C library with bioinformatic data format parsers and BWT and SW aligners

boids icon boids

Simple implementation of boids in Rust and Macroquad.

cabezazo icon cabezazo

Making a game in a week or less: week 1

contig-alias icon contig-alias

Service to provide synonyms of chromosome/contig identifiers

datastore icon datastore

Datastore library for querying RDBMS and NoSQL databases

docs icon docs

Conan.io documentation at Read the Docs

eva icon eva

European Variation Archive

eva-pipeline icon eva-pipeline

Pipeline for the European Variation Archive, implemented using Luigi from Spotify (https://github.com/spotify/luigi)

eva-tools icon eva-tools

Tools compatible with the infrastructure of the European Variation Archive pipeline

eva-v2 icon eva-v2

Next-generation European Variation Archive (WIP)

eva-web icon eva-web

Web front-end for the European Variation Archive

fongo icon fongo

faked out in-memory mongo for java

genome-maps icon genome-maps

An open-source high-performance web-based HTML5 genome browser. Genome Maps can easily be customize and allow browsing user data such as BAM and VCF files among other formats.

hpg-bigdata icon hpg-bigdata

This repository implements converters and tools for working with NGS data in HPC or Hadoop cluster

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