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acousticthresholds

NMFS has provided this Web Calculator as an optional tool to provide estimated effect distances (i.e., isopleths) where PTS onset thresholds may be exceeded. Results provided by this calculator do not represent the entirety of the comprehensive effects analysis, but rather serve as one tool to help evaluate the effects of a proposed action on marine mammal hearing and make findings required by NOAA's various statutes. Input values are the responsibility of the individual user.

across-180-and-back

discussions and lessons related to the challenges of spatial analysis and mapping in R when the area of interest crosses 180 degrees longitude

akpvsurveys-app

R/Shiny application in support of Alaska harbor seal abundance data

aleutpv_tagstatus_2016

aleutpvdata

atex

Animal Telemetry Exchange Format

aws-ec2-geospatial

bash script for configuring an Amazon Linux 2 AWS EC2 instance for geospatial analysis in R

bam-glmmldts

bas-spatial-workshop

bering-strait-science

presentation materials for the 2022 Bering Strait Science talk

bls7-code-of-conduct

Bio-logging Symposium 7 Code of Conduct

coaster

planned R package for geospatial coastal data

compendium

repository template for typical research compendium

cookinlet-seal-movt

crawl

R package for modeling animal movement with continuous-time correlated random walk models

crawl-workshop

slides, data, code and a book in support of workshops at AFSC and SWFSC for the R package `crawl`

crawl2

crawl_examples

crawlr

utilities and visualization functions in support of the crawl R package

crawlutils

crwexampleakbs

AK bearded and spotted seal example dataset and analysis.

ctmm-funcs

initial set of functions and demo scripts for using `ctmm` with marine animal data

dolphin_isotopes

This repository provides R code used for portions of the stable isotope analysis in McCluskey et al 2020

esdm

A user-friendly spatial tool with a web-based interface that allows users to import SDM layers and create and explore ensemble predictions to inform management and explore spatial uncertainties

furrr

Apply Mapping Functions in Parallel using Futures

ggthemes

ggplot themes and scales

git-r-done

A Presentation: using R, git and github to further reproducible and open science

github-guide

GitHub Guide developed by NMFS Open Science

glmmldts

generalized linear mixed models for massive data sets of continuous time series data

hc_whales

Manuscript in Prep/PrePrint: Impacts of Two Extended Foraging Events by Mammal-Eating Killer Whales on the Population of Harbor Seals in Hood Canal, Washington.