Git Product home page Git Product logo

jjlea's Projects

ancombc icon ancombc

Differential abundance (DA) analysis for microbial absolute abundance data

archr icon archr

ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)

biom icon biom

Development version of the biom package for R

biom-format icon biom-format

The Biological Observation Matrix (BIOM) Format Project

cart-microbiome icon cart-microbiome

Here we submitted codes on the manuscript entitled "CAR-T cell therapy-related cytokine release syndrome and therapeutic response is modulated by the gut microbiome in hematologic malignancies".

cellchat icon cellchat

R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data

copd_multiomics icon copd_multiomics

This repository contains computer codes for main analyses of the manuscript titled 'Multi-omic Landscape of Airway Microbe-Host Interaction in Chronic Obstructive Pulmonary Disease'.

delayedmatrixstats icon delayedmatrixstats

A port of the matrixStats API to work with DelayedMatrix objects from the DelayedArray package

dose icon dose

:mask: Disease Ontology Semantic and Enrichment analysis

doubletdecon icon doubletdecon

A tool for removing doublets from single-cell RNA-seq data

doubletfinder icon doubletfinder

R package for detecting doublets in single-cell RNA sequencing data

fgsea icon fgsea

Fast Gene Set Enrichment Analysis

functionink icon functionink

Community detection method for multidimensional networks

gosemsim icon gosemsim

:golf: GO-terms Semantic Similarity Measures

groningen-microbiome icon groningen-microbiome

Microbiome Projects from the Department of Genetics and Department of Gastroenterology and Hepatology , University Medical Centre Groningen

harmony icon harmony

Fast, sensitive and accurate integration of single-cell data with Harmony

iterpc icon iterpc

iterpc: deprecated in favour of https://github.com/randy3k/arrangements

ldsc icon ldsc

LD Score Regression (LDSC)

mendelianrandomization icon mendelianrandomization

:exclamation: This is a read-only mirror of the CRAN R package repository. MendelianRandomization — Mendelian Randomization Package

picrust2 icon picrust2

Code, unit tests, and tutorials for running PICRUSt2

qvalue icon qvalue

R package to estimate q-values and false discovery rate quantities.

scdrs icon scdrs

Single-cell disease relevance score (scDRS)

scmicrobiome icon scmicrobiome

Mapping metagenome-wide polygenic signals to human scRNA-seq atlas

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. 📊📈🎉

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google ❤️ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.