jhsiao999 Goto Github PK

ailprobpaper

Source for the paper Broman KW (2012) Haplotype probabilities in advanced intercross populations. G3 2:199-202

ash

Code and analyses from "FDR: A New Deal" paper

ashbun

modeling single cell abundance

ashlar

Workflow template

bookdown

Authoring Books with R Markdown

bookdown-demo

A minimal book example using bookdown

bulkrnaseqmousescialdoneesc

cellcycler

R package for cell cycle phasing and analysis

classifer

classtpx

An R package for Semi-supervised Topic models

count-clustering

Repository to complement Dey et al, "Clustering RNA-seq..."

countclust

A R package for counts clustering

datapackages-site

devtools

Tools to make an R developer's life easier

difftimeexpression

doctoc

Generates table of contents for markdown files inside local git repository. Links are compatible with anchors generated by github or other sites.

dropseq

dsc-log-fold-change

dsc to compare approaches to estimating/testing log-fold-change from counts

dsc2

Repo for next stage of DSC project

dsc_conquer_comparison

dscr

Dynamic statistical comparisons in R

dscr-gtex-total

fiveminutestats

A repo of short "vignettes" illustrating statistical concepts; http://stephens999.github.io/fiveMinuteStats/analysis/

flowmap

fucci-seq

ggplot2

An implementation of the Grammar of Graphics in R

humanzee

Tools for statistical analysis of genomics data

intermediate_git

Plans and slides for a four-hour short course in intermediate Git.

kbroman.github.io

Karl Broman's website

kkdey.github.io

Personal webpage