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Hi, I'm Jelle šŸ‘‹

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Iā€™m a Research Engineer @UtrechtUniversity with a background in Movement Ecology and Earth Sciences.

As a Research Engineer I:

  • collaborate as a scientific programmer in research projects across domains
  • advice and support researchers on HPC systems
  • promote coding/software best practices in research @UtrechtUniversity

šŸ’¬ Find my email on my UU profile page

Jelle Treep's Projects

audio2text icon audio2text

Python command line utility wrappers for Whispercpp and other speech-to-text utilities

cognitivemapr icon cognitivemapr

Once the coding stage of your cognitive mapping (CM) project is done, there are many analyses and calculations you can do. Find some useful functions here to help you analyse your CM data

ibridges icon ibridges

A wrapper around the python-irodsclient to allow for easy interaction with iRODS servers.

metasynth icon metasynth

Python reference implementation for synthetic data generation based on the Generative Metadata Format.

parcels icon parcels

Main code for Parcels (Probably A Really Computationally Efficient Lagrangian Simulator)

patch-dispersal icon patch-dispersal

Supplemental code for the paper: "Seed dispersal as a search strategy: dynamic and fragmented landscapes select for multi-scale movement strategies in plants" in Movement Ecology 2021

presentations icon presentations

Template repository for creating a UU styled Quarto presentation

programming-cafe icon programming-cafe

Repository for the Programming Cafe community event at @UtrechtUniversity

readme-templates icon readme-templates

A collection of README templates from around the UU and other institutions.

repco-may icon repco-may

Template repository for demonstration purposes

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