jeffyang123 Goto Github PK

aa_new

chromscape

ChromSCape

clinical-model

医学统计学与临床建模

colabfold

Making Protein folding accessible to all!

colabgeek

Run useful tools on Google Colab

competition-baseline

数据科学竞赛知识、代码、思路

count2fpkm

This Scirpt is used to transform the Read Count to FPKM by using DESeq2

course

MindSpore course

dep

protein

domaincaller

A Python implementation of the original DI domain caller

hic-pipeline

hic_data

A (continuously updated) collection of references to Hi-C data. Predominantly human/mouse Hi-C data, with replicates.

hic_pipeline

An easy-to-use Hi-C data processing software supporting distributed computation.

hicpipe

an efficient Hi-C data processing pipeline

hicplus

hicplus-1

intro-to-chipseq

Intro to ChIPseq using HPC

intron_retention_analysis_senescence

Intron retention analysis for RNA-seq of cellular senescence models

introngtf

a simple script to generate intronic annotations in GTF format

machinelearningnotes

My personal notes

mindspore-gan

MindSpore implementations of Generative Adversarial Networks.

mindspore-nlp-tutorial

Natural Language Processing Tutorial for MindSpore Users

network_data

python-bio

rcmc_analysis_code

Code associated with with the bioRxiv preprint "Region Capture Micro-C reveals coalescence of enhancers and promoters into nested microcompartments", found here: https://www.biorxiv.org/content/10.1101/2022.07.12.499637v1

readcounts2fpkm_and_tpm

rnaseq

RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

scanpytor

单细胞格式转换

single-cell-papers-with-code

Papers with code for single cell related papers

single-myonucleus