jdeschamps Goto Github PK

acqtest

Playground to test Micro-Manager acquisitions

bioimage.io

Website for the BioImage Model zoo -- a model zoo for bioimage analysis.

blik

Blik is a python tool for visualising and interacting with cryo-ET and subtomogram averaging data.

careamics.github.io

clairvoyant

Software designed to identify and monitor social/historical cues for short term stock movement

compare-metrics

core-bioimage-io-python

Python libraries for loading, running and packaging bioimage.io models

cryohub

IO hub for Cryo-EM, Cryo-ET and subtomogram averaging data.

denoiseg_fiji

dl_tensorflow_pytorch

emu

A Micro-Manager plugin that loads easily reconfigurable user interfaces.

emu-guide

Guide to EMU, a Micro-Manager plugin to load easily reconfigurable user interfaces.

git-novice

Software Carpentry introduction to Git for novices.

guiv2

htsmlm

An EMU plugin to control a localization microscope in Micro-Manager and perform unsupervised imaging.

i18n

Where all the translations are controlled from.

i2kconference2024

I2K Conference Website

imagej-modelzoo

imagej-tensorflow

ImageJ/TensorFlow integration library

imglib2-algorithm

Image processing algorithms for ImgLib2

imglib2-algorithm-gpl

Image processing algorithms for ImgLib2 (GPL-licensed)

imglib2-introductory-workshop

ImgLib2 Introductory Workshop

imglib2-roi

Regions of interest (ROIs) and labelings for ImgLib2

jdeschamps.github.io

micro-manager

Microscope control and image acquisition integrated with ImageJ.

micro-manager.github.io

Micro-Manager website source

mm-ownadapters

Custom Micro-manager device adapters

mm2-das

mmcoreanddevices

The c++ code at the core of the Micro-Manager project.

n2v_fiji