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arem

AREM -- Aligning Reads by Expectation-Maximization

bedtools

A powerful toolset for genome arithmetic.

biopython

Official git repository for Biopython (converted from CVS)

charityada.org

cloud-builders

Supported builder images for Google Cloud Build

cotools

functional tools for cooperative multitasking.

dbt-core

dbt (data build tool) is a command line tool that enables data analysts and engineers to transform data in their warehouse more effectively.

dotfiles

fling

Fling media to a ChromeCast device

git-cl

a git-command for integrating reviews on Rietveld

git-cola

git-cola: The highly caffeinated git GUI

google-code-issues-migrator

A simple script to migrate issues from google code to github.

hts-waterworks

A Ruffus pipeline for Analysis of High-Throughput Sequencing data

incubator-airflow

Apache Airflow (Incubating)

ipython

Official repository for IPython itself. Other repos in the IPython organization contain things like the website, documentation builds, etc.

motility

pybedtools

Python wrapper -- and more -- for Aaron Quinlan's BEDTools (bioinformatics tools)

pygithub

Python library implementing the full Github API v3

pymc

Bayesian inference in Python

rstpreview

RstPreview - a SublimeText plugin to view RST files in your browser.

ruffus

Ruffus is a lightweight python module for running computational pipelines.

scikit-learn

scikit-learn: machine learning in Python

starcluster

StarCluster is a utility for creating and managing computing clusters hosted on Amazon's Elastic Compute Cloud (EC2).

vadersentiment

VADER Sentiment Analysis. VADER (Valence Aware Dictionary and sEntiment Reasoner) is a lexicon and rule-based sentiment analysis tool that is specifically attuned to sentiments expressed in social media, and works well on texts from other domains.