Related Issues (20)
- Use https://github.com/pachterlab/gget to get gene info (e.g. ncbi description, gene aliases, canonical transcript)
- Fix freebayesJointCall backend to bind contigStr variable and use vcfanno for gnomad annotations
- Integrate gene:phenotype associations HOT 4
- Real-time / saved data - periodic updates HOT 2
- Variant annotations
- Update API
- Analysis versioning and history
- Update dependencies
- Communication features HOT 2
- Gene list is out of date HOT 3
- HLA-DRB3
- There should be more validation to ensure that user selected correct genome build
- No transcripts for GALC
- Don't override HTTPS_SERVICES in code; use same iobio backend as referenced in .env
- The affected and unaffected sibs are not loaded after filling in on Files Dialog
- Add 'MANE SELECT' tag to genes panel next to transcript.
- dbSNP urls HOT 1
- Genes with "OR" in the name
- Spec out integration with Mosaic
- Need informative 'no transcripts for gene' message when gene added from 'genes list' or gene dropdown.
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