The Infectious Disease Ecology and Modelling Team's Projects
Where we write notes and ideas for code review in the IDEM group
Create Contact Matrices from Population Data
Extracting the demo parts of https://github.com/idem-lab/map-ir-gp-stack
example greta workflow using targets
Estimating epi intervals from transmission pair data
Predictor variables for insecticide resistance modelling.
lowest-level functional interface for GPreff
Reproducing and remixing the R code for running the model ensemble described in Hancock et al. (2020), Mapping Insecticide Resistance Phenotypes in African Malaria Vectors
Prototype/pseudo code demonstrating stacked generalisation method used in https://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.3000633#sec010
Helper functions for workflows used in modelling species distributions
Hub for curated modelling & data training resources relevant to collaborators of the Vector Atlas.