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The Infectious Disease Ecology and Modelling Team's Projects

code-review icon code-review

Where we write notes and ideas for code review in the IDEM group

conmat icon conmat

Create Contact Matrices from Population Data

demo-map-ir icon demo-map-ir

Extracting the demo parts of https://github.com/idem-lab/map-ir-gp-stack

intervals icon intervals

Estimating epi intervals from transmission pair data

map-ir-gp-stack icon map-ir-gp-stack

Reproducing and remixing the R code for running the model ensemble described in Hancock et al. (2020), Mapping Insecticide Resistance Phenotypes in African Malaria Vectors

map-ir-pipeline icon map-ir-pipeline

Prototype/pseudo code demonstrating stacked generalisation method used in https://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.3000633#sec010

sdmtools icon sdmtools

Helper functions for workflows used in modelling species distributions

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