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jisoopark avatar jisoopark commented on August 24, 2024

Hi Eigo,

Even though you don't have actual drug response values for the (cell line, drug) pairs, you should have the 3rd column in the drugcell_test.txt file to be able to make a prediction. Could you add dummy values in the 3rd column in drugcell_test.txt file and re-run the prediction script for now? I will make a fix in the predict_drugcell.py file so that it can handle the 2 column file test data file in the next commit. Thanks!

Best,
Jisoo

from drugcell.

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