Comments (3)
Looking at the logs under
'{workspace}/.log'
I do see the accession that is generated is indicated (in my case, for Analysis object, and EGAZ accession).
It would still be better that this information was provided in a receipt of some sort, as opposed to a log file in a hidden folder
from egasub.
This is addressed in #68 as far as recording EGA Accession ID is concerned. Will later make this information more accessible via egasub status
or egasub report
command.
from egasub.
Upon successful submission, relevant EGA accession IDs are kept in .status/*.log
TSV files (last row). Closing this feature request.
from egasub.
Related Issues (15)
- 'alias' can not include special characters HOT 1
- Allow previously submitted samples to bypass local validation
- Neccessity of running dry_run prior to submission
- Allow additional information be provided as tag-value pairs via 'attributes' HOT 1
- Analysis objects, submitting multiple bam files HOT 2
- specify location of files on EGA staging server
- consistent command line usage for dataset submission
- SOP Appendix, provide more detail on list of Reference Chromosomes
- Dataset description
- running egasub on xfer.res.oicr.on.ca
- error running egasub : can not get ICGC ID HOT 7
- EGASub does not allow dot character in submission directory name HOT 1
- Missing dataset description HOT 1
- update github tag "ega" to "ega-archive" HOT 1
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from egasub.