Comments (5)
dweindl
commented on August 25, 2024
1
I discussed with @DantongWang that all plotting routines should take a matplotlib.axes.Axes as optional input. This allows to extend the respective plot and should make it also pretty simple to add additional trajectories.
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FFroehlich
commented on August 25, 2024
can we please use http://ggplot.yhathq.com instead of matplotlib? The plotting routines really aren't something one should dread when switching from matlab and the grammar of graphics is such a neat concept.
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dweindl
commented on August 25, 2024
I don't have too much experience with ggplot. Anybody here using this in python? The repository hasn't been updated in 2 years...
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FFroehlich
commented on August 25, 2024
https://github.com/has2k1/plotnine is a fork of ggplot that seems to be more active
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yannikschaelte
commented on August 25, 2024
matplotlib is the default plotting routine though, so worked on by more developers, so less risk of running into issues at some point/date, and more functionality I would guess ...
(and i think the syntax is close to but still better than matlab, in particular more object-oriented) ...
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Related Issues (20)
- Reading ensemble_predictions from hd5f fails if summary was saved
- Software using pymc HOT 2
- Flaky test `test_pipeline[Metropolis-rosenbrock]` HOT 1
- `ReturnDataReportingMode` not handled correctly for `AggregatedObjective` HOT 9
- fval is not saved in hdf5 file in multistart optimization HOT 2
- Problems with startpoint method HOT 2
- SciPy optimizer does redundant function evaluations e.g. for AMICI objectives HOT 1
- Pypesto Optimization ignores bounds HOT 6
- `ScipyDifferentialEvolutionOptimizer` appears to load the AMICI model many times HOT 4
- Deprecation for `get_for_key` notice suggests code that will error. HOT 2
- Flaky test `test/sample/test_sample.py::test_samples_cis` HOT 8
- Python version support policy HOT 1
- Remove chi2, schi2 from history HOT 4
- Failure to load HDF5 history from write-protected files
- AMICI expects rdata not dict HOT 5
- pymc sampler appears to not sample correctly HOT 1
- pypesto import is slow HOT 13
- Q: Remove theano? HOT 1
- Issue using MultiProcess engine HOT 2
- Plenty of GitHub Actions warnings
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