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Ian Jonsen's Projects

animotum icon animotum

fit latent variable movement models to animal tracking data

bsam icon bsam

Bayesian State-space models for Animal Movement

ctd_qc icon ctd_qc

Quality control of IMOS CTD profile data

ctrw icon ctrw

use a Continuous-Time Random Walk SSM to filter Argos Least Squares or Kalman Filter location data

deadsmolt icon deadsmolt

simulation of Atlantic salmon migration & death

duckconfit icon duckconfit

State-space filtering code for RAATD data paper

imos_qc icon imos_qc

location quality control of active IMOS SRDL-CTD deployments

momentuhmm icon momentuhmm

Maximum likelihood analysis Of animal MovemENT behavior Using multivariate Hidden Markov Models

mpm icon mpm

(animal) Move Persistence Model

mpmm icon mpmm

(animal) Move Persistence Mixed effects Models

sensorgnome-r-package icon sensorgnome-r-package

R package for using telemetry data; soon to be replaced by http://github.com/jbrzusto/motus

simfish icon simfish

simulate fish tracks with/without acoustic detections in semi-realistic environments

simsmolt icon simsmolt

Simulate salmon smolt migration and potential for acoustic detection

slootr icon slootr

R tools for manipulating Argos tracking data

ssmtmb icon ssmtmb

A fast state-space model for filtering Argos satellite tracking data

tdwg_imos icon tdwg_imos

Argos satellite tracking of southern elephant seals via SMRU SRDL-CTD tags

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